| Publication type: | Article in scientific journal |
| Type of review: | Peer review (publication) |
| Title: | Erwinia amylovora phage vB_EamM_Y3 represents another lineage of hairy myoviridae |
| Authors: | Buttimer, Colin Born, Yannick Lucid, Alan Loessner, Martin J. Fieseler, Lars Coffey, Aidan |
| et. al: | No |
| DOI: | 10.1016/j.resmic.2018.04.006 |
| Published in: | Research in Microbiology |
| Volume(Issue): | 169 |
| Issue: | 9 |
| Page(s): | 505 |
| Pages to: | 514 |
| Issue Date: | 2018 |
| Publisher / Ed. Institution: | Elsevier |
| ISSN: | 0923-2508 1769-7123 |
| Language: | English |
| Subjects: | Erwinia amylovora; Genome; Hairy phage; Jumbo bacteriophage; Myoviridae; SAR endolysin; DNA replication; DNA, Viral; Endopeptidases; Erwinia amylovora; Myoviridae; Open reading frame; Phylogeny; DNA sequence analysis; Viral proteins; Virion; Viral genome |
| Subject (DDC): | 570: Biology |
| Abstract: | To date, a small number of jumbo myoviruses have been reported to possess atypical whisker-like structures along the surface of their contractile tails. Erwinia amylovora phage vB_EamM_Y3 is another example. It possesses a genome of 261,365 kbp with 333 predicted ORFs. Using a combination of BLASTP, Interproscan and HHpred, about 21% of its putative proteins could be assigned functions involved in nucleotide metabolism, DNA replication, virion structure and cell wall degradation. The phage was found to have a signal-arrest-release (SAR) endolysin (Y3_301) possessing a soluble lytic transglycosylase domain. Like other SAR endolysins, inducible expression of Y3_301 caused Escherichia coli lysis, which is dependent on the presence of an N-terminal signal sequence. Phylogenetic analysis showed that its closest relatives are other jumbo phages including Pseudomonas aeruginosa phage PaBG and P. putida phage Lu11, sharing 105 and 87 homologous proteins respectively. Like these phages, Y3 also shares a distant relationship to Ralstonia solanacearum phage ΦRSL1 (sharing 55 homologous proteins). As these phages are unrelated to the Rak2-like group of hairy phages, Y3 along with Lu11 represent a second lineage of hairy myoviruses. |
| URI: | https://digitalcollection.zhaw.ch/handle/11475/18411 |
| Fulltext version: | Published version |
| License (according to publishing contract): | Licence according to publishing contract |
| Departement: | Life Sciences and Facility Management |
| Organisational Unit: | Institute of Food and Beverage Innovation (ILGI) |
| Published as part of the ZHAW project: | Mechanisms of phage resistance in Erwinia amylovora |
| Appears in collections: | Publikationen Life Sciences und Facility Management |
Files in This Item:
There are no files associated with this item.
Show full item record
Buttimer, C., Born, Y., Lucid, A., Loessner, M. J., Fieseler, L., & Coffey, A. (2018). Erwinia amylovora phage vB_EamM_Y3 represents another lineage of hairy myoviridae. Research in Microbiology, 169(9), 505–514. https://doi.org/10.1016/j.resmic.2018.04.006
Buttimer, C. et al. (2018) ‘Erwinia amylovora phage vB_EamM_Y3 represents another lineage of hairy myoviridae’, Research in Microbiology, 169(9), pp. 505–514. Available at: https://doi.org/10.1016/j.resmic.2018.04.006.
C. Buttimer, Y. Born, A. Lucid, M. J. Loessner, L. Fieseler, and A. Coffey, “Erwinia amylovora phage vB_EamM_Y3 represents another lineage of hairy myoviridae,” Research in Microbiology, vol. 169, no. 9, pp. 505–514, 2018, doi: 10.1016/j.resmic.2018.04.006.
BUTTIMER, Colin, Yannick BORN, Alan LUCID, Martin J. LOESSNER, Lars FIESELER und Aidan COFFEY, 2018. Erwinia amylovora phage vB_EamM_Y3 represents another lineage of hairy myoviridae. Research in Microbiology. 2018. Bd. 169, Nr. 9, S. 505–514. DOI 10.1016/j.resmic.2018.04.006
Buttimer, Colin, Yannick Born, Alan Lucid, Martin J. Loessner, Lars Fieseler, and Aidan Coffey. 2018. “Erwinia Amylovora Phage vB_EamM_Y3 Represents Another Lineage of Hairy Myoviridae.” Research in Microbiology 169 (9): 505–14. https://doi.org/10.1016/j.resmic.2018.04.006.
Buttimer, Colin, et al. “Erwinia Amylovora Phage vB_EamM_Y3 Represents Another Lineage of Hairy Myoviridae.” Research in Microbiology, vol. 169, no. 9, 2018, pp. 505–14, https://doi.org/10.1016/j.resmic.2018.04.006.
Items in DSpace are protected by copyright, with all rights reserved, unless otherwise indicated.