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dc.contributor.authorvan der Wolf, Jan M.-
dc.contributor.authorNijhuis, Els H.-
dc.contributor.authorKowalewska, Malgorzata J.-
dc.contributor.authorSaddler, Gerry S.-
dc.contributor.authorParkinson, Neil-
dc.contributor.authorElphinstone, John G.-
dc.contributor.authorPritchard, Leighton-
dc.contributor.authorToth, Ian K.-
dc.contributor.authorLojkowska, Ewa-
dc.contributor.authorPotrykus, Marta-
dc.contributor.authorWaleron, Malgorzata-
dc.contributor.authorde Vos, Paul-
dc.contributor.authorCleenwerck, Ilse-
dc.contributor.authorPirhonen, Minna-
dc.contributor.authorGarlant, Linda-
dc.contributor.authorHélias, Valérie-
dc.contributor.authorPothier, Joël F.-
dc.contributor.authorPflüger, Valentin-
dc.contributor.authorDuffy, Brion-
dc.contributor.authorTsror, Leah-
dc.contributor.authorManulis, Shula-
dc.date.accessioned2017-12-04T13:51:43Z-
dc.date.available2017-12-04T13:51:43Z-
dc.date.issued2014-03-01-
dc.identifier.issn1466-5026de_CH
dc.identifier.issn1466-5034de_CH
dc.identifier.urihttps://digitalcollection.zhaw.ch/handle/11475/1662-
dc.description.abstractPectinolytic bacteria have been recently isolated from diseased potato plants exhibiting blackleg and slow wilt symptoms found in a number of European countries and Israel. These Gram-reaction-negative, motile, rods were identified as belonging to the genus Dickeya, previously the Pectobacterium chrysanthemi complex (Erwinia chrysanthemi), on the basis of production of a PCR product with the pelADE primers, 16S rRNA gene sequence analysis, fatty acid methyl esterase analysis, the production of phosphatases and the ability to produce indole and acids from α-methylglucoside. Differential physiological assays used previously to differentiate between strains of E. chrysanthemi, showed that these isolates belonged to biovar 3. Eight of the isolates, seven from potato and one from hyacinth, were analysed together with 21 reference strains representing all currently recognized taxa within the genus Dickeya. The novel isolates formed a distinct genetic clade in multilocus sequence analysis (MLSA) using concatenated sequences of the intergenic spacer (IGS), as well as dnaX, recA, dnaN, fusA, gapA, purA, rplB, rpoS and gyrA. Characterization by whole-cell MALDI-TOF mass spectrometry, pulsed field gel electrophoresis after digestion of whole-genome DNA with rare-cutting restriction enzymes, average nucleotide identity analysis and DNA–DNA hybridization studies, showed that although related to Dickeya dadantii, these isolates represent a novel species within the genus Dickeya, for which the name Dickeya solani sp. nov. (type strain IPO 2222T = LMG25993T = NCPPB4479T) is proposed.de_CH
dc.language.isoende_CH
dc.publisherMicrobiology Societyde_CH
dc.relation.ispartofInternational Journal of Systematic and Evolutionary Microbiologyde_CH
dc.rightsLicence according to publishing contractde_CH
dc.subject.ddc570: Biologiede_CH
dc.titleDickeya solani sp. nov., a pectinolytic plant-pathogenic bacterium isolated from potato (Solanum tuberosum)de_CH
dc.typeBeitrag in wissenschaftlicher Zeitschriftde_CH
dcterms.typeTextde_CH
zhaw.departementLife Sciences und Facility Managementde_CH
zhaw.organisationalunitInstitut für Umwelt und Natürliche Ressourcen (IUNR)de_CH
zhaw.publisher.placeLondonde_CH
dc.identifier.doi10.1099/ijs.0.052944-0de_CH
zhaw.funding.euNode_CH
zhaw.originated.zhawYesde_CH
zhaw.pages.end774de_CH
zhaw.pages.start768de_CH
zhaw.publication.statuspublishedVersionde_CH
zhaw.volume64de_CH
zhaw.publication.reviewPeer review (Publikation)de_CH
zhaw.webfeedUmweltgenomikde_CH
zhaw.funding.zhawMALDI-TOF MS for microorganism identification: from pattern recognition towards marker based approachesde_CH
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van der Wolf, J. M., Nijhuis, E. H., Kowalewska, M. J., Saddler, G. S., Parkinson, N., Elphinstone, J. G., Pritchard, L., Toth, I. K., Lojkowska, E., Potrykus, M., Waleron, M., de Vos, P., Cleenwerck, I., Pirhonen, M., Garlant, L., Hélias, V., Pothier, J. F., Pflüger, V., Duffy, B., et al. (2014). Dickeya solani sp. nov., a pectinolytic plant-pathogenic bacterium isolated from potato (Solanum tuberosum). International Journal of Systematic and Evolutionary Microbiology, 64, 768–774. https://doi.org/10.1099/ijs.0.052944-0
van der Wolf, J.M. et al. (2014) ‘Dickeya solani sp. nov., a pectinolytic plant-pathogenic bacterium isolated from potato (Solanum tuberosum)’, International Journal of Systematic and Evolutionary Microbiology, 64, pp. 768–774. Available at: https://doi.org/10.1099/ijs.0.052944-0.
J. M. van der Wolf et al., “Dickeya solani sp. nov., a pectinolytic plant-pathogenic bacterium isolated from potato (Solanum tuberosum),” International Journal of Systematic and Evolutionary Microbiology, vol. 64, pp. 768–774, Mar. 2014, doi: 10.1099/ijs.0.052944-0.
VAN DER WOLF, Jan M., Els H. NIJHUIS, Malgorzata J. KOWALEWSKA, Gerry S. SADDLER, Neil PARKINSON, John G. ELPHINSTONE, Leighton PRITCHARD, Ian K. TOTH, Ewa LOJKOWSKA, Marta POTRYKUS, Malgorzata WALERON, Paul DE VOS, Ilse CLEENWERCK, Minna PIRHONEN, Linda GARLANT, Valérie HÉLIAS, Joël F. POTHIER, Valentin PFLÜGER, Brion DUFFY, Leah TSROR und Shula MANULIS, 2014. Dickeya solani sp. nov., a pectinolytic plant-pathogenic bacterium isolated from potato (Solanum tuberosum). International Journal of Systematic and Evolutionary Microbiology. 1 März 2014. Bd. 64, S. 768–774. DOI 10.1099/ijs.0.052944-0
van der Wolf, Jan M., Els H. Nijhuis, Malgorzata J. Kowalewska, Gerry S. Saddler, Neil Parkinson, John G. Elphinstone, Leighton Pritchard, et al. 2014. “Dickeya Solani Sp. Nov., A Pectinolytic Plant-Pathogenic Bacterium Isolated from Potato (Solanum Tuberosum).” International Journal of Systematic and Evolutionary Microbiology 64 (March): 768–74. https://doi.org/10.1099/ijs.0.052944-0.
van der Wolf, Jan M., et al. “Dickeya Solani Sp. Nov., A Pectinolytic Plant-Pathogenic Bacterium Isolated from Potato (Solanum Tuberosum).” International Journal of Systematic and Evolutionary Microbiology, vol. 64, Mar. 2014, pp. 768–74, https://doi.org/10.1099/ijs.0.052944-0.


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