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https://doi.org/10.21256/zhaw-1825| Publication type: | Article in scientific journal |
| Type of review: | Peer review (publication) |
| Title: | A candidate gene for fire blight resistance in Malus × robusta 5 is coding for a CC-NBS-LRR |
| Authors: | Fahrentrapp, Johannes Broggini, Giovanni A. L. Kellerhals, Markus Peil, Andreas Richter, Klaus Zini, Elena Gessler, Cesare |
| DOI: | 10.21256/zhaw-1825 10.1007/s11295-012-0550-3 |
| Published in: | Tree Genetics & Genomes |
| Volume(Issue): | 9 |
| Issue: | 1 |
| Page(s): | 237 |
| Pages to: | 251 |
| Issue Date: | Feb-2013 |
| Publisher / Ed. Institution: | Springer |
| ISSN: | 1614-2942 1614-2950 |
| Language: | English |
| Subjects: | Resistance gene; Apple; Weinbau; Fire blight |
| Subject (DDC): | 634: Orchards, fruits and forestry |
| Abstract: | Fire blight is the most important bacterial disease in apple (Malus × domestica) and pear (Pyrus communis) production. Today, the causal bacterium Erwinia amylovora is present in many apple- and pear-growing areas. We investigated the natural resistance of the wild apple Malus × robusta 5 against E. amylovora, previously mapped to linkage group 3. With a fine-mapping approach on a population of 2,133 individuals followed by phenotyping of the recombinants from the region of interest, we developed flanking markers useful for marker-assisted selection. Open reading frames were predicted on the sequence of a BAC spanning the resistance locus. One open reading frame coded for a protein belonging to the NBS–LRR family. The in silico investigation of the structure of the candidate resistance gene against fire blight of M. × robusta 5, FB_MR5, led us hypothesize the presence of a coiled-coil region followed by an NBS and an LRR-like structure with the consensus ‘LxxLx[IL]xxCxxLxxL’. The function of FB_MR5 was predicted in agreement with the decoy/guard model, that FB_MR5 monitors the transcribed RIN4_MR5, a homolog of RIN4 of Arabidopsis thaliana that could interact with the previously described effector AvrRpt2EA of E. amylovora. |
| Further description: | Erworben im Rahmen der Schweizer Nationallizenzen (http://www.nationallizenzen.ch) |
| URI: | https://digitalcollection.zhaw.ch/handle/11475/4103 |
| Fulltext version: | Published version |
| License (according to publishing contract): | Licence according to publishing contract |
| Departement: | Life Sciences and Facility Management |
| Organisational Unit: | Institute of Natural Resource Sciences (IUNR) |
| Appears in collections: | Publikationen Life Sciences und Facility Management |
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| File | Description | Size | Format | |
|---|---|---|---|---|
| 2013_Fahrentrapp_A_candidate_gene_for_fire_blight.pdf | 668.45 kB | Adobe PDF |  View/Open |
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Fahrentrapp, J., Broggini, G. A. L., Kellerhals, M., Peil, A., Richter, K., Zini, E., & Gessler, C. (2013). A candidate gene for fire blight resistance in Malus × robusta 5 is coding for a CC-NBS-LRR. Tree Genetics & Genomes, 9(1), 237–251. https://doi.org/10.21256/zhaw-1825
Fahrentrapp, J. et al. (2013) ‘A candidate gene for fire blight resistance in Malus × robusta 5 is coding for a CC-NBS-LRR’, Tree Genetics & Genomes, 9(1), pp. 237–251. Available at: https://doi.org/10.21256/zhaw-1825.
J. Fahrentrapp et al., “A candidate gene for fire blight resistance in Malus × robusta 5 is coding for a CC-NBS-LRR,” Tree Genetics & Genomes, vol. 9, no. 1, pp. 237–251, Feb. 2013, doi: 10.21256/zhaw-1825.
FAHRENTRAPP, Johannes, Giovanni A. L. BROGGINI, Markus KELLERHALS, Andreas PEIL, Klaus RICHTER, Elena ZINI und Cesare GESSLER, 2013. A candidate gene for fire blight resistance in Malus × robusta 5 is coding for a CC-NBS-LRR. Tree Genetics & Genomes. Februar 2013. Bd. 9, Nr. 1, S. 237–251. DOI 10.21256/zhaw-1825
Fahrentrapp, Johannes, Giovanni A. L. Broggini, Markus Kellerhals, Andreas Peil, Klaus Richter, Elena Zini, and Cesare Gessler. 2013. “A Candidate Gene for Fire Blight Resistance in Malus × Robusta 5 Is Coding for a CC-NBS-LRR.” Tree Genetics & Genomes 9 (1): 237–51. https://doi.org/10.21256/zhaw-1825.
Fahrentrapp, Johannes, et al. “A Candidate Gene for Fire Blight Resistance in Malus × Robusta 5 Is Coding for a CC-NBS-LRR.” Tree Genetics & Genomes, vol. 9, no. 1, Feb. 2013, pp. 237–51, https://doi.org/10.21256/zhaw-1825.
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